Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubr7Q8BU04 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ubr7Q8BU04 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubr7Q8BU04 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ubr7Q8BU04 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubr7Q8BU04 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.77□□□□□ -0.04
Ubr7Q8BU04 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubr7Q8BU04 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm13453-201ENSMUST00000118708 357 ntBASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm12428-201ENSMUST00000119844 727 ntBASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm27680-201ENSMUST00000184192 160 ntBASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm6888-201ENSMUST00000221983 706 ntBASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.77□□□□□ -0.05
Ubr7Q8BU04 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.76□□□□□ -0.05
Ubr7Q8BU04 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Gm10275-202ENSMUST00000168697 495 ntBASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Gm27631-201ENSMUST00000184163 466 ntBASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Gm10275-201ENSMUST00000092620 635 ntBASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr7Q8BU04 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gm24543-201ENSMUST00000103867 82 ntBASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gm6222-201ENSMUST00000120787 396 ntBASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gm17837-201ENSMUST00000186435 985 ntBASIC14.75□□□□□ -0.05
Ubr7Q8BU04 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr7Q8BU04 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms