Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Ank2-226ENSMUST00000189368 339 ntBASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gm18246-201ENSMUST00000221023 728 ntBASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdhr3Q8BL00 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm11764-201ENSMUST00000120221 623 ntBASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm28033-201ENSMUST00000184224 96 ntBASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdhr3Q8BL00 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.8□□□□□ -0.36
Cdhr3Q8BL00 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms