Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.04■□□□□ -0
Chmp2bQ8BJF9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gm7222-201ENSMUST00000117512 906 ntBASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2bQ8BJF9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.02■□□□□ -0
Chmp2bQ8BJF9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gm27459-201ENSMUST00000184860 107 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms