Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Gm11779-201ENSMUST00000118541 368 ntBASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh20Q8BIZ0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh20Q8BIZ0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.33□□□□□ -0.11
Pcdh20Q8BIZ0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Gm5264-201ENSMUST00000190584 848 ntBASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh20Q8BIZ0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh20Q8BIZ0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms