Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf38Q8BI21 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Gm18246-201ENSMUST00000221023 728 ntBASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf38Q8BI21 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf38Q8BI21 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms