Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm11025-201ENSMUST00000140773 466 ntBASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm2451-201ENSMUST00000199447 999 ntBASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Gm10290-201ENSMUST00000200451 999 ntBASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4bQ8BGE6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4bQ8BGE6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Gm45612-201ENSMUST00000211320 160 ntBASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atg4bQ8BGE6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms