Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Gm27702-201ENSMUST00000184512 56 ntBASIC14.47□□□□□ -0.09
Ubp1Q811S7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubp1Q811S7 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.47□□□□□ -0.09
Ubp1Q811S7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.46□□□□□ -0.09
Ubp1Q811S7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.46□□□□□ -0.09
Ubp1Q811S7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ubp1Q811S7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubp1Q811S7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Gm15483-201ENSMUST00000120338 456 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.45□□□□□ -0.1
Ubp1Q811S7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms