Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.29□□□□□ -0.12
Trim50Q810I2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim50Q810I2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim50Q810I2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim50Q810I2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.28□□□□□ -0.12
Trim50Q810I2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim50Q810I2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim50Q810I2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.28□□□□□ -0.12
Trim50Q810I2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim50Q810I2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.28□□□□□ -0.12
Trim50Q810I2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim50Q810I2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim50Q810I2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim50Q810I2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim50Q810I2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim50Q810I2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.27□□□□□ -0.13
Trim50Q810I2 Rpph1-201ENSMUST00000175096 319 ntBASIC14.27□□□□□ -0.13
Trim50Q810I2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim50Q810I2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim50Q810I2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim50Q810I2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim50Q810I2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.26□□□□□ -0.13
Trim50Q810I2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Gm17271-201ENSMUST00000165535 355 ntBASIC14.26□□□□□ -0.13
Trim50Q810I2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.26□□□□□ -0.13
Trim50Q810I2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.26□□□□□ -0.13
Trim50Q810I2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms