Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trnp1Q80ZI1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trnp1Q80ZI1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trnp1Q80ZI1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Gm14660-201ENSMUST00000119809 575 ntBASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Gm8463-201ENSMUST00000208573 613 ntBASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trnp1Q80ZI1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Gm11814-201ENSMUST00000119515 929 ntBASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Trnp1Q80ZI1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trnp1Q80ZI1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Gm12882-201ENSMUST00000121696 517 ntBASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms