Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Gm4535-201ENSMUST00000182274 558 ntBASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Gm10355-201ENSMUST00000097146 517 ntBASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Gm37153-201ENSMUST00000193637 231 ntBASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3bQ80YF6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3bQ80YF6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Upk3bQ80YF6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3bQ80YF6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3bQ80YF6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm33142-201ENSMUST00000193913 867 ntBASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.39□□□□□ -0.43
Upk3bQ80YF6 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms