Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm13392-201ENSMUST00000117708 150 ntBASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ttc28Q80XJ3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Olfr286-202ENSMUST00000205305 969 ntBASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ttc28Q80XJ3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Mir1894-201ENSMUST00000122802 81 ntBASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ttc28Q80XJ3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms