Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3cQ80U95 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3cQ80U95 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3cQ80U95 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3cQ80U95 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3cQ80U95 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3cQ80U95 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Syt7-204ENSMUST00000223586 1344 ntBASIC17.24■□□□□ 0.35
Ube3cQ80U95 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.24■□□□□ 0.35
Ube3cQ80U95 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Gm27838-201ENSMUST00000184829 128 ntBASIC17.24■□□□□ 0.35
Ube3cQ80U95 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Mir125a-201ENSMUST00000083545 68 ntBASIC17.24■□□□□ 0.35
Ube3cQ80U95 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3cQ80U95 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.23■□□□□ 0.35
Ube3cQ80U95 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.23■□□□□ 0.35
Ube3cQ80U95 Gm4875-201ENSMUST00000118257 786 ntBASIC17.23■□□□□ 0.35
Ube3cQ80U95 Gm15321-201ENSMUST00000121290 288 ntBASIC17.23■□□□□ 0.35
Ube3cQ80U95 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3cQ80U95 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Gm5866-201ENSMUST00000177881 973 ntBASIC17.22■□□□□ 0.35
Ube3cQ80U95 Gm29667-201ENSMUST00000190817 490 ntBASIC17.22■□□□□ 0.35
Ube3cQ80U95 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3cQ80U95 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Gm16215-201ENSMUST00000161990 637 ntBASIC17.21■□□□□ 0.35
Ube3cQ80U95 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ube3cQ80U95 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms