Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.04■□□□□ 0.16
Ush1gQ80T11 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.04■□□□□ 0.16
Ush1gQ80T11 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.04■□□□□ 0.16
Ush1gQ80T11 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm7488-201ENSMUST00000117148 684 ntBASIC16.03■□□□□ 0.16
Ush1gQ80T11 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm27920-201ENSMUST00000183953 96 ntBASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm28630-201ENSMUST00000187806 498 ntBASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ush1gQ80T11 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ush1gQ80T11 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.02■□□□□ 0.15
Ush1gQ80T11 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.02■□□□□ 0.15
Ush1gQ80T11 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ush1gQ80T11 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Gm13015-201ENSMUST00000118674 204 ntBASIC16.01■□□□□ 0.15
Ush1gQ80T11 Gm29541-201ENSMUST00000191351 678 ntBASIC16.01■□□□□ 0.15
Ush1gQ80T11 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.01■□□□□ 0.15
Ush1gQ80T11 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.01■□□□□ 0.15
Ush1gQ80T11 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.01■□□□□ 0.15
Ush1gQ80T11 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms