Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.39■□□□□ 0.38
Sned1Q70E20 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.39■□□□□ 0.38
Sned1Q70E20 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.39■□□□□ 0.38
Sned1Q70E20 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sned1Q70E20 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sned1Q70E20 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Sned1Q70E20 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.39■□□□□ 0.37
Sned1Q70E20 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.39■□□□□ 0.37
Sned1Q70E20 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sned1Q70E20 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.38■□□□□ 0.37
Sned1Q70E20 Gm16570-201ENSMUST00000161951 436 ntBASIC17.38■□□□□ 0.37
Sned1Q70E20 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.38■□□□□ 0.37
Sned1Q70E20 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sned1Q70E20 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.38■□□□□ 0.37
Sned1Q70E20 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sned1Q70E20 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sned1Q70E20 Gm15808-201ENSMUST00000119046 604 ntBASIC17.38■□□□□ 0.37
Sned1Q70E20 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Gm27682-201ENSMUST00000183930 110 ntBASIC17.38■□□□□ 0.37
Sned1Q70E20 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sned1Q70E20 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sned1Q70E20 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Gm15371-201ENSMUST00000117057 784 ntBASIC17.37■□□□□ 0.37
Sned1Q70E20 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Gm26083-201ENSMUST00000157904 193 ntBASIC17.37■□□□□ 0.37
Sned1Q70E20 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Gm29705-201ENSMUST00000212598 474 ntBASIC17.37■□□□□ 0.37
Sned1Q70E20 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.37■□□□□ 0.37
Sned1Q70E20 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.37■□□□□ 0.37
Sned1Q70E20 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.37■□□□□ 0.37
Sned1Q70E20 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sned1Q70E20 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.37■□□□□ 0.37
Sned1Q70E20 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.36■□□□□ 0.37
Sned1Q70E20 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.36■□□□□ 0.37
Sned1Q70E20 Gm11793-201ENSMUST00000120433 981 ntBASIC17.36■□□□□ 0.37
Sned1Q70E20 Gm10156-201ENSMUST00000122364 462 ntBASIC17.36■□□□□ 0.37
Sned1Q70E20 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sned1Q70E20 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.36■□□□□ 0.37
Sned1Q70E20 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sned1Q70E20 Gm37259-201ENSMUST00000193903 849 ntBASIC17.36■□□□□ 0.37
Sned1Q70E20 Cts7-204ENSMUST00000225321 1257 ntBASIC17.36■□□□□ 0.37
Sned1Q70E20 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sned1Q70E20 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.35■□□□□ 0.37
Sned1Q70E20 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms