Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 AC149294.4-201ENSMUST00000227870 882 ntBASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gm38391-201ENSMUST00000191720 4069 ntBASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gm21854-201ENSMUST00000179901 471 ntBASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gm27920-201ENSMUST00000183953 96 ntBASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 AC238811.1-201ENSMUST00000225302 441 ntBASIC4.99□□□□□ -1.61
Syne1Q6ZWR6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm19430-201ENSMUST00000193847 2137 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm18187-201ENSMUST00000196476 984 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm13216-201ENSMUST00000117145 591 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm17150-201ENSMUST00000165577 381 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm29310-201ENSMUST00000185468 696 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm21825-201ENSMUST00000185728 696 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm29109-201ENSMUST00000185895 696 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm21896-201ENSMUST00000186520 696 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm21873-201ENSMUST00000186728 696 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm21794-201ENSMUST00000187056 696 ntBASIC4.98□□□□□ -1.61
Syne1Q6ZWR6 Gm21880-201ENSMUST00000187275 696 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms