Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Ddx58Q6Q899 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx58Q6Q899 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx58Q6Q899 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx58Q6Q899 Gm10275-202ENSMUST00000168697 495 ntBASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Gm10275-201ENSMUST00000092620 635 ntBASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx58Q6Q899 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Gm15487-201ENSMUST00000122373 465 ntBASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx58Q6Q899 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms