Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Gm2383-201ENSMUST00000181461 807 ntBASIC12.32□□□□□ -0.44
Rif1Q6PR54 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 B9d1os-201ENSMUST00000137010 674 ntBASIC12.31□□□□□ -0.44
Rif1Q6PR54 Mir5120-201ENSMUST00000175020 78 ntBASIC12.31□□□□□ -0.44
Rif1Q6PR54 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.31□□□□□ -0.44
Rif1Q6PR54 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.31□□□□□ -0.44
Rif1Q6PR54 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rif1Q6PR54 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.3□□□□□ -0.44
Rif1Q6PR54 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.3□□□□□ -0.44
Rif1Q6PR54 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm22323-201ENSMUST00000103832 109 ntBASIC12.3□□□□□ -0.44
Rif1Q6PR54 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm12566-201ENSMUST00000121479 359 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms