Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd4Q6PDQ2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Gm5035-201ENSMUST00000215581 927 ntBASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Chd4Q6PDQ2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Mir497b-201ENSMUST00000093601 125 ntBASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd4Q6PDQ2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd4Q6PDQ2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd4Q6PDQ2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd4Q6PDQ2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd4Q6PDQ2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Gm21470-201ENSMUST00000187680 696 ntBASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd4Q6PDQ2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm15240-201ENSMUST00000118156 720 ntBASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm19078-201ENSMUST00000206311 727 ntBASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm18062-201ENSMUST00000208020 547 ntBASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm18055-201ENSMUST00000208254 547 ntBASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm15376-201ENSMUST00000122258 783 ntBASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Gm4804-201ENSMUST00000182234 999 ntBASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd4Q6PDQ2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms