Protein–RNA interactions for Protein: Q6P3B9

Rbfa, Putative ribosome-binding factor A, mitochondrial, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RbfaQ6P3B9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm24543-201ENSMUST00000103867 82 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm13453-201ENSMUST00000118708 357 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm10275-202ENSMUST00000168697 495 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm27533-201ENSMUST00000183800 152 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm38294-201ENSMUST00000192831 381 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm6888-201ENSMUST00000221983 706 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm10275-201ENSMUST00000092620 635 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RbfaQ6P3B9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Efs-202ENSMUST00000227037 2540 ntBASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Gm17837-201ENSMUST00000186435 985 ntBASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RbfaQ6P3B9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm14042-201ENSMUST00000120139 833 ntBASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm14767-201ENSMUST00000121559 586 ntBASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm27306-201ENSMUST00000183970 107 ntBASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm27680-201ENSMUST00000184192 160 ntBASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RbfaQ6P3B9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RbfaQ6P3B9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.17■□□□□ 0.02
RbfaQ6P3B9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RbfaQ6P3B9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RbfaQ6P3B9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RbfaQ6P3B9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms