Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Gm10175-201ENSMUST00000086013 645 ntBASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac4Q6NZM9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm14494-201ENSMUST00000118786 435 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm15467-201ENSMUST00000120582 445 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm5479-201ENSMUST00000160578 435 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm27525-201ENSMUST00000184465 107 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm37230-201ENSMUST00000194491 818 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm20553-201ENSMUST00000204205 844 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm45098-201ENSMUST00000207179 657 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac4Q6NZM9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hdac4Q6NZM9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Hdac4Q6NZM9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hdac4Q6NZM9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Gm9182-201ENSMUST00000217829 639 ntBASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.39■□□□□ 0.21
Hdac4Q6NZM9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Gm14042-201ENSMUST00000120139 833 ntBASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac4Q6NZM9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms