Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Scube3Q66PY1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scube3Q66PY1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scube3Q66PY1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scube3Q66PY1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scube3Q66PY1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.41■□□□□ 0.06
Scube3Q66PY1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Gm14701-201ENSMUST00000117156 348 ntBASIC15.41■□□□□ 0.06
Scube3Q66PY1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.41■□□□□ 0.06
Scube3Q66PY1 Gm18737-201ENSMUST00000173594 937 ntBASIC15.41■□□□□ 0.06
Scube3Q66PY1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scube3Q66PY1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm14057-201ENSMUST00000120631 482 ntBASIC15.4■□□□□ 0.06
Scube3Q66PY1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm38225-201ENSMUST00000194001 393 ntBASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm6991-201ENSMUST00000218475 1178 ntBASIC15.4■□□□□ 0.06
Scube3Q66PY1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.4■□□□□ 0.06
Scube3Q66PY1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scube3Q66PY1 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.4■□□□□ 0.06
Scube3Q66PY1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Gm5312-201ENSMUST00000203728 547 ntBASIC15.39■□□□□ 0.05
Scube3Q66PY1 Olfr286-202ENSMUST00000205305 969 ntBASIC15.39■□□□□ 0.05
Scube3Q66PY1 Gm45098-201ENSMUST00000207179 657 ntBASIC15.39■□□□□ 0.05
Scube3Q66PY1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.39■□□□□ 0.05
Scube3Q66PY1 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.39■□□□□ 0.05
Scube3Q66PY1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms