Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim27Q62158 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim27Q62158 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.01■□□□□ 0.47
Trim27Q62158 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim27Q62158 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim27Q62158 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.01■□□□□ 0.47
Trim27Q62158 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim27Q62158 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.01■□□□□ 0.47
Trim27Q62158 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim27Q62158 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim27Q62158 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim27Q62158 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim27Q62158 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18■□□□□ 0.47
Trim27Q62158 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18■□□□□ 0.47
Trim27Q62158 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim27Q62158 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim27Q62158 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18■□□□□ 0.47
Trim27Q62158 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim27Q62158 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim27Q62158 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.99■□□□□ 0.47
Trim27Q62158 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim27Q62158 Gm11745-201ENSMUST00000121669 448 ntBASIC17.99■□□□□ 0.47
Trim27Q62158 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim27Q62158 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim27Q62158 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim27Q62158 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim27Q62158 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trim27Q62158 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.99■□□□□ 0.47
Trim27Q62158 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.99■□□□□ 0.47
Trim27Q62158 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim27Q62158 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.98■□□□□ 0.47
Trim27Q62158 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
Trim27Q62158 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.98■□□□□ 0.47
Trim27Q62158 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trim27Q62158 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim27Q62158 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms