Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.53□□□□□ -0.24
VcanQ62059 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.53□□□□□ -0.24
VcanQ62059 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.53□□□□□ -0.24
VcanQ62059 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 BC001981-202ENSMUST00000191393 1545 ntBASIC13.53□□□□□ -0.24
VcanQ62059 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.53□□□□□ -0.24
VcanQ62059 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.53□□□□□ -0.24
VcanQ62059 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcanQ62059 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VcanQ62059 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcanQ62059 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.52□□□□□ -0.24
VcanQ62059 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.52□□□□□ -0.24
VcanQ62059 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VcanQ62059 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.52□□□□□ -0.25
VcanQ62059 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Gm5363-201ENSMUST00000211927 938 ntBASIC13.52□□□□□ -0.25
VcanQ62059 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
VcanQ62059 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcanQ62059 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.51□□□□□ -0.25
VcanQ62059 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.51□□□□□ -0.25
VcanQ62059 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.51□□□□□ -0.25
VcanQ62059 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VcanQ62059 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
VcanQ62059 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.51□□□□□ -0.25
VcanQ62059 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Gm29649-201ENSMUST00000185649 419 ntBASIC13.51□□□□□ -0.25
VcanQ62059 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.51□□□□□ -0.25
VcanQ62059 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.51□□□□□ -0.25
VcanQ62059 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VcanQ62059 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VcanQ62059 Snord83b-201ENSMUST00000104546 94 ntBASIC13.51□□□□□ -0.25
VcanQ62059 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.51□□□□□ -0.25
VcanQ62059 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.51□□□□□ -0.25
VcanQ62059 Rps4l-202ENSMUST00000204242 789 ntBASIC13.51□□□□□ -0.25
VcanQ62059 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VcanQ62059 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.5□□□□□ -0.25
VcanQ62059 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.5□□□□□ -0.25
VcanQ62059 Gm16505-201ENSMUST00000179981 232 ntBASIC13.5□□□□□ -0.25
VcanQ62059 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.5□□□□□ -0.25
VcanQ62059 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.5□□□□□ -0.25
VcanQ62059 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
VcanQ62059 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
VcanQ62059 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.5□□□□□ -0.25
VcanQ62059 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
VcanQ62059 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms