Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ctr9Q62018 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ctr9Q62018 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.29■□□□□ 0.36
Ctr9Q62018 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ctr9Q62018 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.29■□□□□ 0.36
Ctr9Q62018 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ctr9Q62018 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctr9Q62018 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.28■□□□□ 0.36
Ctr9Q62018 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.28■□□□□ 0.36
Ctr9Q62018 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.28■□□□□ 0.36
Ctr9Q62018 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ctr9Q62018 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ctr9Q62018 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ctr9Q62018 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctr9Q62018 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ctr9Q62018 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Ctr9Q62018 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.27■□□□□ 0.36
Ctr9Q62018 Gm6415-201ENSMUST00000118488 348 ntBASIC17.27■□□□□ 0.36
Ctr9Q62018 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ctr9Q62018 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.27■□□□□ 0.36
Ctr9Q62018 Gm18049-201ENSMUST00000208909 581 ntBASIC17.27■□□□□ 0.36
Ctr9Q62018 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.27■□□□□ 0.36
Ctr9Q62018 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.27■□□□□ 0.36
Ctr9Q62018 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctr9Q62018 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ctr9Q62018 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ctr9Q62018 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctr9Q62018 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctr9Q62018 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctr9Q62018 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ctr9Q62018 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctr9Q62018 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Gm27430-201ENSMUST00000184585 107 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Gm44333-201ENSMUST00000197168 107 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Olfr286-202ENSMUST00000205305 969 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Gm45098-201ENSMUST00000207179 657 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms