Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 Gm10154-201ENSMUST00000084445 354 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.31□□□□□ -0.6
Notch3Q61982 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Notch3Q61982 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.31□□□□□ -0.6
Notch3Q61982 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.3□□□□□ -0.6
Notch3Q61982 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Notch3Q61982 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Notch3Q61982 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.3□□□□□ -0.6
Notch3Q61982 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Notch3Q61982 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Notch3Q61982 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Notch3Q61982 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.3□□□□□ -0.6
Notch3Q61982 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch3Q61982 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Notch3Q61982 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.29□□□□□ -0.6
Notch3Q61982 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Notch3Q61982 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
Notch3Q61982 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Notch3Q61982 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Notch3Q61982 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Notch3Q61982 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Notch3Q61982 Gm11543-201ENSMUST00000120758 370 ntBASIC11.29□□□□□ -0.6
Notch3Q61982 Gm12151-201ENSMUST00000121374 290 ntBASIC11.29□□□□□ -0.6
Notch3Q61982 Gm27989-201ENSMUST00000184721 107 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms