Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.04□□□□□ -0.16
Runx1t1Q61909 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.04□□□□□ -0.16
Runx1t1Q61909 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Runx1t1Q61909 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gm11764-201ENSMUST00000120221 623 ntBASIC14.03□□□□□ -0.16
Runx1t1Q61909 Mir5131-201ENSMUST00000175426 93 ntBASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gm4899-201ENSMUST00000178708 719 ntBASIC14.03□□□□□ -0.16
Runx1t1Q61909 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.03□□□□□ -0.16
Runx1t1Q61909 AV026068-213ENSMUST00000223675 1171 ntBASIC14.03□□□□□ -0.16
Runx1t1Q61909 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.03□□□□□ -0.16
Runx1t1Q61909 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Runx1t1Q61909 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Runx1t1Q61909 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Runx1t1Q61909 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.01□□□□□ -0.17
Runx1t1Q61909 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.01□□□□□ -0.17
Runx1t1Q61909 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Runx1t1Q61909 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms