Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm14822-201ENSMUST00000122247 291 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm25911-201ENSMUST00000157621 56 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm27397-201ENSMUST00000184997 107 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm45747-201ENSMUST00000212203 999 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Thap2-203ENSMUST00000218989 527 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Gm5867-201ENSMUST00000063197 592 ntBASIC14.31□□□□□ -0.12
Vsx2Q61412 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Gm24513-201ENSMUST00000174964 138 ntBASIC14.3□□□□□ -0.12
Vsx2Q61412 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.3□□□□□ -0.12
Vsx2Q61412 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx2Q61412 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Gm27301-201ENSMUST00000184012 127 ntBASIC14.29□□□□□ -0.12
Vsx2Q61412 Gm27702-201ENSMUST00000184512 56 ntBASIC14.29□□□□□ -0.12
Vsx2Q61412 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.29□□□□□ -0.12
Vsx2Q61412 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.29□□□□□ -0.12
Vsx2Q61412 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vsx2Q61412 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms