Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.58■□□□□ 0.41
Mre11Q61216 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Mre11Q61216 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mre11Q61216 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Mre11Q61216 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mre11Q61216 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.58■□□□□ 0.41
Mre11Q61216 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mre11Q61216 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Mre11Q61216 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.58■□□□□ 0.4
Mre11Q61216 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mre11Q61216 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.58■□□□□ 0.4
Mre11Q61216 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.58■□□□□ 0.4
Mre11Q61216 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mre11Q61216 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Mre11Q61216 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mre11Q61216 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mre11Q61216 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.57■□□□□ 0.4
Mre11Q61216 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.57■□□□□ 0.4
Mre11Q61216 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mre11Q61216 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Mre11Q61216 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Mre11Q61216 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mre11Q61216 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Mre11Q61216 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mre11Q61216 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Gm13836-201ENSMUST00000121159 501 ntBASIC17.56■□□□□ 0.4
Mre11Q61216 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.56■□□□□ 0.4
Mre11Q61216 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.56■□□□□ 0.4
Mre11Q61216 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mre11Q61216 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mre11Q61216 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mre11Q61216 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.55■□□□□ 0.4
Mre11Q61216 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.55■□□□□ 0.4
Mre11Q61216 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.55■□□□□ 0.4
Mre11Q61216 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mre11Q61216 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Mre11Q61216 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms