Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hcfc1Q61191 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc1Q61191 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gm12957-201ENSMUST00000117835 377 ntBASIC12.18□□□□□ -0.46
Hcfc1Q61191 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Mir1982-201ENSMUST00000157368 74 ntBASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.18□□□□□ -0.46
Hcfc1Q61191 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gm13392-201ENSMUST00000117708 150 ntBASIC12.18□□□□□ -0.46
Hcfc1Q61191 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc1Q61191 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.17□□□□□ -0.46
Hcfc1Q61191 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.17□□□□□ -0.46
Hcfc1Q61191 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc1Q61191 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hcfc1Q61191 Gm37424-201ENSMUST00000191727 561 ntBASIC12.16□□□□□ -0.46
Hcfc1Q61191 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms