Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Gm11793-201ENSMUST00000120433 981 ntBASIC14.24□□□□□ -0.13
Col12a1Q60847 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col12a1Q60847 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.23□□□□□ -0.13
Col12a1Q60847 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Col12a1Q60847 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col12a1Q60847 Gm43818-201ENSMUST00000200605 466 ntBASIC14.23□□□□□ -0.13
Col12a1Q60847 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.23□□□□□ -0.13
Col12a1Q60847 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.23□□□□□ -0.13
Col12a1Q60847 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.23□□□□□ -0.13
Col12a1Q60847 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col12a1Q60847 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col12a1Q60847 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.23□□□□□ -0.13
Col12a1Q60847 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.22□□□□□ -0.13
Col12a1Q60847 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col12a1Q60847 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
Col12a1Q60847 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.22□□□□□ -0.13
Col12a1Q60847 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.22□□□□□ -0.13
Col12a1Q60847 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.22□□□□□ -0.13
Col12a1Q60847 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col12a1Q60847 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.22□□□□□ -0.13
Col12a1Q60847 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.22□□□□□ -0.13
Col12a1Q60847 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.22□□□□□ -0.13
Col12a1Q60847 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.22□□□□□ -0.13
Col12a1Q60847 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.22□□□□□ -0.13
Col12a1Q60847 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col12a1Q60847 Gm22331-201ENSMUST00000158066 136 ntBASIC14.21□□□□□ -0.13
Col12a1Q60847 Gm27341-201ENSMUST00000183570 106 ntBASIC14.21□□□□□ -0.13
Col12a1Q60847 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.21□□□□□ -0.13
Col12a1Q60847 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.21□□□□□ -0.13
Col12a1Q60847 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col12a1Q60847 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.21□□□□□ -0.13
Col12a1Q60847 Gm24514-201ENSMUST00000174961 285 ntBASIC14.21□□□□□ -0.13
Col12a1Q60847 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.21□□□□□ -0.13
Col12a1Q60847 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col12a1Q60847 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col12a1Q60847 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col12a1Q60847 Gm13464-201ENSMUST00000119418 935 ntBASIC14.21□□□□□ -0.14
Col12a1Q60847 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col12a1Q60847 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.21□□□□□ -0.14
Col12a1Q60847 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Col12a1Q60847 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col12a1Q60847 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col12a1Q60847 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Gm5161-201ENSMUST00000075243 853 ntBASIC14.2□□□□□ -0.14
Col12a1Q60847 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Gm38671-201ENSMUST00000200573 130 ntBASIC14.2□□□□□ -0.14
Col12a1Q60847 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms