Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ClpbQ60649 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ClpbQ60649 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ClpbQ60649 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpbQ60649 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpbQ60649 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpbQ60649 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpbQ60649 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
ClpbQ60649 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
ClpbQ60649 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpbQ60649 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ClpbQ60649 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.08□□□□□ -0.15
ClpbQ60649 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.08□□□□□ -0.16
ClpbQ60649 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.08□□□□□ -0.16
ClpbQ60649 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ClpbQ60649 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.08□□□□□ -0.16
ClpbQ60649 Gm15427-201ENSMUST00000117288 531 ntBASIC14.08□□□□□ -0.16
ClpbQ60649 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.08□□□□□ -0.16
ClpbQ60649 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.08□□□□□ -0.16
ClpbQ60649 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.08□□□□□ -0.16
ClpbQ60649 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ClpbQ60649 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.08□□□□□ -0.16
ClpbQ60649 Gm43767-201ENSMUST00000198933 381 ntBASIC14.08□□□□□ -0.16
ClpbQ60649 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.08□□□□□ -0.16
ClpbQ60649 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ClpbQ60649 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.08□□□□□ -0.16
ClpbQ60649 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ClpbQ60649 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpbQ60649 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Gm23935-201ENSMUST00000102303 57 ntBASIC14.07□□□□□ -0.16
ClpbQ60649 Gm24270-201ENSMUST00000102326 57 ntBASIC14.07□□□□□ -0.16
ClpbQ60649 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Gm24245-201ENSMUST00000157318 57 ntBASIC14.07□□□□□ -0.16
ClpbQ60649 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Gm2272-201ENSMUST00000194903 582 ntBASIC14.07□□□□□ -0.16
ClpbQ60649 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.07□□□□□ -0.16
ClpbQ60649 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClpbQ60649 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.07□□□□□ -0.16
ClpbQ60649 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.07□□□□□ -0.16
ClpbQ60649 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpbQ60649 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClpbQ60649 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClpbQ60649 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ClpbQ60649 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClpbQ60649 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms