Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Gm13464-201ENSMUST00000119418 935 ntBASIC14.03□□□□□ -0.16
Xrcc1Q60596 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Gm27920-201ENSMUST00000183953 96 ntBASIC14.03□□□□□ -0.16
Xrcc1Q60596 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.03□□□□□ -0.16
Xrcc1Q60596 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Efs-202ENSMUST00000227037 2540 ntBASIC14.03□□□□□ -0.16
Xrcc1Q60596 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Xrcc1Q60596 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Xrcc1Q60596 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Xrcc1Q60596 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Xrcc1Q60596 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Gm18737-201ENSMUST00000173594 937 ntBASIC14.01□□□□□ -0.17
Xrcc1Q60596 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Xrcc1Q60596 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms