Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gm13015-201ENSMUST00000118674 204 ntBASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gm13453-201ENSMUST00000118708 357 ntBASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shroom1Q5SX79 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shroom1Q5SX79 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.58■□□□□ 0.08
Shroom1Q5SX79 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shroom1Q5SX79 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Celf4-206ENSMUST00000224553 1729 ntBASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Gm12428-201ENSMUST00000119844 727 ntBASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Mir6977-201ENSMUST00000184960 64 ntBASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Gm28630-201ENSMUST00000187806 498 ntBASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shroom1Q5SX79 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms