Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm3436-201ENSMUST00000179930 840 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm24694-201ENSMUST00000180054 110 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm27663-201ENSMUST00000184839 110 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Olfr286-202ENSMUST00000205305 969 ntBASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gm45453-201ENSMUST00000211758 853 ntBASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-2Q5R1I4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-2Q5R1I4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-2Q5R1I4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-2Q5R1I4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-2Q5R1I4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-2Q5R1I4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-2Q5R1I4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms