Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Gm22175-201ENSMUST00000175007 78 ntBASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Gm2451-201ENSMUST00000199447 999 ntBASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Gm10290-201ENSMUST00000200451 999 ntBASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Gm18049-201ENSMUST00000208909 581 ntBASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-4Q5R1I0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-4Q5R1I0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms