Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5d-4Q5R1F6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Gm14140-201ENSMUST00000119999 995 ntBASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav5d-4Q5R1F6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5d-4Q5R1F6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms