Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Gm7977-201ENSMUST00000193787 748 ntBASIC15.31■□□□□ 0.04
Vps41Q5KU39 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.31■□□□□ 0.04
Vps41Q5KU39 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps41Q5KU39 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.3■□□□□ 0.04
Vps41Q5KU39 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.3■□□□□ 0.04
Vps41Q5KU39 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.3■□□□□ 0.04
Vps41Q5KU39 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.3■□□□□ 0.04
Vps41Q5KU39 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps41Q5KU39 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.3■□□□□ 0.04
Vps41Q5KU39 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44357-201ENSMUST00000195897 142 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm19658-201ENSMUST00000196231 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44367-201ENSMUST00000196836 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44350-201ENSMUST00000197197 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44390-201ENSMUST00000197533 144 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44313-201ENSMUST00000198018 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44486-201ENSMUST00000198508 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44314-201ENSMUST00000199263 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44394-201ENSMUST00000199558 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44484-201ENSMUST00000199873 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44466-201ENSMUST00000200264 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gm44359-201ENSMUST00000200671 138 ntBASIC15.29■□□□□ 0.04
Vps41Q5KU39 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps41Q5KU39 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps41Q5KU39 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms