Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf20Q5DTM8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf20Q5DTM8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gm2451-201ENSMUST00000199447 999 ntBASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gm10290-201ENSMUST00000200451 999 ntBASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf20Q5DTM8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf20Q5DTM8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Gm9385-201ENSMUST00000117563 472 ntBASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Gm44492-201ENSMUST00000197012 141 ntBASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf20Q5DTM8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms