Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Q3U1D9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Q3U1D9 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.73□□□□□ -0.37
Q3U1D9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.73□□□□□ -0.37
Q3U1D9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3U1D9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Q3U1D9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Q3U1D9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Q3U1D9 Gm8749-201ENSMUST00000117737 331 ntBASIC12.72□□□□□ -0.37
Q3U1D9 Gm14767-201ENSMUST00000121559 586 ntBASIC12.72□□□□□ -0.37
Q3U1D9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Gm28630-201ENSMUST00000187806 498 ntBASIC12.72□□□□□ -0.37
Q3U1D9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.72□□□□□ -0.37
Q3U1D9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Q3U1D9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.72□□□□□ -0.37
Q3U1D9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Q3U1D9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Q3U1D9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.72□□□□□ -0.37
Q3U1D9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.72□□□□□ -0.37
Q3U1D9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q3U1D9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Q3U1D9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Q3U1D9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Gm13223-201ENSMUST00000118609 747 ntBASIC12.71□□□□□ -0.37
Q3U1D9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.71□□□□□ -0.37
Q3U1D9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.71□□□□□ -0.37
Q3U1D9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.71□□□□□ -0.37
Q3U1D9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Q3U1D9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Gm9726-201ENSMUST00000180321 678 ntBASIC12.71□□□□□ -0.37
Q3U1D9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.71□□□□□ -0.37
Q3U1D9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Q3U1D9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q3U1D9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3U1D9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Q3U1D9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3U1D9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Q3U1D9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3U1D9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3U1D9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3U1D9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q3U1D9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.71□□□□□ -0.38
Q3U1D9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms