Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gm12882-201ENSMUST00000121696 517 ntBASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gm9229-201ENSMUST00000222777 126 ntBASIC14.05□□□□□ -0.16
Hoxc4Q08624 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.05□□□□□ -0.16
Hoxc4Q08624 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Mir125a-201ENSMUST00000083545 68 ntBASIC14.05□□□□□ -0.16
Hoxc4Q08624 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.04□□□□□ -0.16
Hoxc4Q08624 Gm15487-201ENSMUST00000122373 465 ntBASIC14.04□□□□□ -0.16
Hoxc4Q08624 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Gm43703-201ENSMUST00000200523 763 ntBASIC14.04□□□□□ -0.16
Hoxc4Q08624 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.04□□□□□ -0.16
Hoxc4Q08624 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.04□□□□□ -0.16
Hoxc4Q08624 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc4Q08624 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.03□□□□□ -0.16
Hoxc4Q08624 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxc4Q08624 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.03□□□□□ -0.16
Hoxc4Q08624 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.03□□□□□ -0.16
Hoxc4Q08624 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms