Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm13823-201ENSMUST00000119930 345 ntBASIC14.87□□□□□ -0.03
Ebf1Q07802 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Gm43438-201ENSMUST00000198133 379 ntBASIC14.87□□□□□ -0.03
Ebf1Q07802 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.87□□□□□ -0.03
Ebf1Q07802 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf1Q07802 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ebf1Q07802 Gm28630-201ENSMUST00000187806 498 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Gm2423-201ENSMUST00000074863 733 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Ebf1Q07802 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.86□□□□□ -0.03
Ebf1Q07802 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf1Q07802 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Gm13015-201ENSMUST00000118674 204 ntBASIC14.85□□□□□ -0.03
Ebf1Q07802 Gm14767-201ENSMUST00000121559 586 ntBASIC14.85□□□□□ -0.03
Ebf1Q07802 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf1Q07802 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.85□□□□□ -0.03
Ebf1Q07802 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Gm7730-201ENSMUST00000212486 454 ntBASIC14.84□□□□□ -0.03
Ebf1Q07802 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms