Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 Gm5403-201ENSMUST00000117105 2795 ntBASIC14.04□□□□□ -0.16
Atf4Q06507 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Atf4Q06507 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Atf4Q06507 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atf4Q06507 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Sybu-209ENSMUST00000228639 4113 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Gm10253-201ENSMUST00000194270 940 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 Gm7774-201ENSMUST00000200064 533 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 Gm9520-201ENSMUST00000209460 1253 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.03□□□□□ -0.16
Atf4Q06507 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atf4Q06507 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atf4Q06507 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf4Q06507 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atf4Q06507 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.02□□□□□ -0.16
Atf4Q06507 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Atf4Q06507 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf4Q06507 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.02□□□□□ -0.16
Atf4Q06507 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Atf4Q06507 Gm25287-201ENSMUST00000103846 110 ntBASIC14.02□□□□□ -0.17
Atf4Q06507 Gm22918-201ENSMUST00000103855 110 ntBASIC14.02□□□□□ -0.17
Atf4Q06507 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Atf4Q06507 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Atf4Q06507 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Gm45072-201ENSMUST00000208673 929 ntBASIC14.02□□□□□ -0.17
Atf4Q06507 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.02□□□□□ -0.17
Atf4Q06507 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.02□□□□□ -0.17
Atf4Q06507 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf4Q06507 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms