Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Snai1Q02085 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Snai1Q02085 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Snai1Q02085 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.72■□□□□ 0.43
Snai1Q02085 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.72■□□□□ 0.43
Snai1Q02085 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Snai1Q02085 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.72■□□□□ 0.43
Snai1Q02085 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Snai1Q02085 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snai1Q02085 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Snai1Q02085 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snai1Q02085 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Snai1Q02085 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snai1Q02085 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Snai1Q02085 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Gm11425-201ENSMUST00000119608 498 ntBASIC17.71■□□□□ 0.43
Snai1Q02085 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.71■□□□□ 0.43
Snai1Q02085 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snai1Q02085 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Snai1Q02085 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Snai1Q02085 AY702102-202ENSMUST00000194651 1173 ntBASIC17.71■□□□□ 0.43
Snai1Q02085 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Gm17795-201ENSMUST00000214505 757 ntBASIC17.71■□□□□ 0.43
Snai1Q02085 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.71■□□□□ 0.43
Snai1Q02085 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Gm9396-201ENSMUST00000076703 567 ntBASIC17.71■□□□□ 0.43
Snai1Q02085 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.71■□□□□ 0.43
Snai1Q02085 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snai1Q02085 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snai1Q02085 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.71■□□□□ 0.42
Snai1Q02085 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Snai1Q02085 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Snai1Q02085 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Snai1Q02085 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.7■□□□□ 0.42
Snai1Q02085 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Snai1Q02085 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Snai1Q02085 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snai1Q02085 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.69■□□□□ 0.42
Snai1Q02085 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.69■□□□□ 0.42
Snai1Q02085 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.69■□□□□ 0.42
Snai1Q02085 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.69■□□□□ 0.42
Snai1Q02085 Gm4804-201ENSMUST00000182234 999 ntBASIC17.69■□□□□ 0.42
Snai1Q02085 Gm27892-201ENSMUST00000185017 106 ntBASIC17.69■□□□□ 0.42
Snai1Q02085 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Snai1Q02085 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Snai1Q02085 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.69■□□□□ 0.42
Snai1Q02085 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snai1Q02085 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.69■□□□□ 0.42
Snai1Q02085 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Snai1Q02085 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Snai1Q02085 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snai1Q02085 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snai1Q02085 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.68■□□□□ 0.42
Snai1Q02085 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Snai1Q02085 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snai1Q02085 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Snai1Q02085 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms