Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.5□□□□□ -0.41
Col8a1Q00780 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col8a1Q00780 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col8a1Q00780 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.49□□□□□ -0.41
Col8a1Q00780 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.49□□□□□ -0.41
Col8a1Q00780 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Gm43703-201ENSMUST00000200523 763 ntBASIC12.49□□□□□ -0.41
Col8a1Q00780 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.49□□□□□ -0.41
Col8a1Q00780 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.49□□□□□ -0.41
Col8a1Q00780 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col8a1Q00780 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col8a1Q00780 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Gm5566-201ENSMUST00000116118 459 ntBASIC12.48□□□□□ -0.41
Col8a1Q00780 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.48□□□□□ -0.41
Col8a1Q00780 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Col8a1Q00780 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col8a1Q00780 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.47□□□□□ -0.41
Col8a1Q00780 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col8a1Q00780 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.47□□□□□ -0.41
Col8a1Q00780 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col8a1Q00780 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.47□□□□□ -0.41
Col8a1Q00780 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms