Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.59□□□□□ -0.39
Smn1P97801 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smn1P97801 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smn1P97801 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Smn1P97801 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.59□□□□□ -0.39
Smn1P97801 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.59□□□□□ -0.39
Smn1P97801 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smn1P97801 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smn1P97801 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Smn1P97801 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smn1P97801 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Smn1P97801 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Smn1P97801 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.58□□□□□ -0.4
Smn1P97801 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.58□□□□□ -0.4
Smn1P97801 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.58□□□□□ -0.4
Smn1P97801 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Gm12895-201ENSMUST00000122214 226 ntBASIC12.58□□□□□ -0.4
Smn1P97801 Gm7284-201ENSMUST00000131667 944 ntBASIC12.58□□□□□ -0.4
Smn1P97801 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.58□□□□□ -0.4
Smn1P97801 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.58□□□□□ -0.4
Smn1P97801 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Smn1P97801 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smn1P97801 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smn1P97801 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smn1P97801 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Smn1P97801 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.57□□□□□ -0.4
Smn1P97801 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.57□□□□□ -0.4
Smn1P97801 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.57□□□□□ -0.4
Smn1P97801 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Smn1P97801 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.57□□□□□ -0.4
Smn1P97801 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.57□□□□□ -0.4
Smn1P97801 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.57□□□□□ -0.4
Smn1P97801 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smn1P97801 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms