Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.33□□□□□ -0.44
Npas1P97459 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
Npas1P97459 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Npas1P97459 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Carlr-201ENSMUST00000181515 2574 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Npas1P97459 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Npas1P97459 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Npas1P97459 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.33□□□□□ -0.44
Npas1P97459 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.32□□□□□ -0.44
Npas1P97459 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Mir6982-201ENSMUST00000184354 68 ntBASIC12.32□□□□□ -0.44
Npas1P97459 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.32□□□□□ -0.44
Npas1P97459 Gm5587-201ENSMUST00000206270 674 ntBASIC12.32□□□□□ -0.44
Npas1P97459 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.32□□□□□ -0.44
Npas1P97459 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.32□□□□□ -0.44
Npas1P97459 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.32□□□□□ -0.44
Npas1P97459 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.32□□□□□ -0.44
Npas1P97459 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.32□□□□□ -0.44
Npas1P97459 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Npas1P97459 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Npas1P97459 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npas1P97459 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.31□□□□□ -0.44
Npas1P97459 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Npas1P97459 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.31□□□□□ -0.44
Npas1P97459 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.31□□□□□ -0.44
Npas1P97459 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Npas1P97459 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.31□□□□□ -0.44
Npas1P97459 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.31□□□□□ -0.44
Npas1P97459 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.31□□□□□ -0.44
Npas1P97459 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.31□□□□□ -0.44
Npas1P97459 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.31□□□□□ -0.44
Npas1P97459 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.31□□□□□ -0.44
Npas1P97459 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.31□□□□□ -0.44
Npas1P97459 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.31□□□□□ -0.44
Npas1P97459 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Npas1P97459 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms