Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.34■□□□□ 0.53
Nkx2-3P97334 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-3P97334 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-3P97334 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Gm25857-201ENSMUST00000082788 129 ntBASIC18.33■□□□□ 0.52
Nkx2-3P97334 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.33■□□□□ 0.52
Nkx2-3P97334 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-3P97334 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Gm12585-201ENSMUST00000117307 290 ntBASIC18.32■□□□□ 0.52
Nkx2-3P97334 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.32■□□□□ 0.52
Nkx2-3P97334 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nkx2-3P97334 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Mir7085-201ENSMUST00000184353 66 ntBASIC18.31■□□□□ 0.52
Nkx2-3P97334 Mir6392-201ENSMUST00000184924 108 ntBASIC18.31■□□□□ 0.52
Nkx2-3P97334 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.31■□□□□ 0.52
Nkx2-3P97334 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-3P97334 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.3■□□□□ 0.52
Nkx2-3P97334 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.3■□□□□ 0.52
Nkx2-3P97334 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-3P97334 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms