Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stra8P70278 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stra8P70278 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Stra8P70278 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC20.27■□□□□ 0.83
Stra8P70278 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Stra8P70278 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Stra8P70278 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Stra8P70278 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC20.26■□□□□ 0.83
Stra8P70278 Mir5131-201ENSMUST00000175426 93 ntBASIC20.26■□□□□ 0.83
Stra8P70278 Gm6550-201ENSMUST00000187574 993 ntBASIC20.26■□□□□ 0.83
Stra8P70278 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.26■□□□□ 0.83
Stra8P70278 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.26■□□□□ 0.83
Stra8P70278 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Gm38577-201ENSMUST00000221531 4545 ntBASIC20.26■□□□□ 0.83
Stra8P70278 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Stra8P70278 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Stra8P70278 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Stra8P70278 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Stra8P70278 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stra8P70278 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Stra8P70278 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Gm18195-201ENSMUST00000207604 706 ntBASIC20.25■□□□□ 0.83
Stra8P70278 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.25■□□□□ 0.83
Stra8P70278 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Stra8P70278 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.25■□□□□ 0.83
Stra8P70278 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC20.25■□□□□ 0.83
Stra8P70278 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stra8P70278 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Stra8P70278 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Stra8P70278 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Stra8P70278 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
Stra8P70278 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Stra8P70278 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stra8P70278 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Stra8P70278 Gm7222-201ENSMUST00000117512 906 ntBASIC20.23■□□□□ 0.83
Stra8P70278 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.23■□□□□ 0.83
Stra8P70278 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Gm43767-201ENSMUST00000198933 381 ntBASIC20.23■□□□□ 0.83
Stra8P70278 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Stra8P70278 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Stra8P70278 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC20.23■□□□□ 0.83
Stra8P70278 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms