Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.73□□□□□ -0.21
Six5P70178 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.73□□□□□ -0.21
Six5P70178 Gm2451-201ENSMUST00000199447 999 ntBASIC13.73□□□□□ -0.21
Six5P70178 Gm10290-201ENSMUST00000200451 999 ntBASIC13.73□□□□□ -0.21
Six5P70178 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.73□□□□□ -0.21
Six5P70178 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Six5P70178 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Six5P70178 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Six5P70178 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
Six5P70178 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.72□□□□□ -0.21
Six5P70178 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.72□□□□□ -0.21
Six5P70178 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.72□□□□□ -0.21
Six5P70178 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Gm18737-201ENSMUST00000173594 937 ntBASIC13.72□□□□□ -0.21
Six5P70178 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.72□□□□□ -0.21
Six5P70178 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.72□□□□□ -0.21
Six5P70178 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.72□□□□□ -0.21
Six5P70178 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.72□□□□□ -0.21
Six5P70178 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Six5P70178 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.72□□□□□ -0.21
Six5P70178 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Six5P70178 Efs-202ENSMUST00000227037 2540 ntBASIC13.72□□□□□ -0.21
Six5P70178 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Six5P70178 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.72□□□□□ -0.21
Six5P70178 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six5P70178 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Six5P70178 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Six5P70178 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Six5P70178 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.71□□□□□ -0.21
Six5P70178 Gm11025-201ENSMUST00000140773 466 ntBASIC13.71□□□□□ -0.21
Six5P70178 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.71□□□□□ -0.21
Six5P70178 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Olfr286-202ENSMUST00000205305 969 ntBASIC13.71□□□□□ -0.21
Six5P70178 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.71□□□□□ -0.21
Six5P70178 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.71□□□□□ -0.21
Six5P70178 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Six5P70178 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six5P70178 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Six5P70178 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Six5P70178 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.7□□□□□ -0.22
Six5P70178 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.7□□□□□ -0.22
Six5P70178 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Six5P70178 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms