Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Crnkl1P63154 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.54□□□□□ -0.08
Crnkl1P63154 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.54□□□□□ -0.08
Crnkl1P63154 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.54□□□□□ -0.08
Crnkl1P63154 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.54□□□□□ -0.08
Crnkl1P63154 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.54□□□□□ -0.08
Crnkl1P63154 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.54□□□□□ -0.08
Crnkl1P63154 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Crnkl1P63154 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Crnkl1P63154 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Crnkl1P63154 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Crnkl1P63154 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.53□□□□□ -0.08
Crnkl1P63154 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.53□□□□□ -0.08
Crnkl1P63154 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.53□□□□□ -0.08
Crnkl1P63154 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Crnkl1P63154 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.53□□□□□ -0.08
Crnkl1P63154 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Crnkl1P63154 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Crnkl1P63154 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Crnkl1P63154 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Crnkl1P63154 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.52□□□□□ -0.09
Crnkl1P63154 Gm12895-201ENSMUST00000122214 226 ntBASIC14.52□□□□□ -0.09
Crnkl1P63154 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.52□□□□□ -0.09
Crnkl1P63154 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Crnkl1P63154 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.52□□□□□ -0.09
Crnkl1P63154 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.52□□□□□ -0.09
Crnkl1P63154 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms